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    2011
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Research Article
Open Access

Neutropenia Prediction Based on First-Cycle Blood Counts Using a FOS-3NN Classifier

Elize A. Shirdel,  Michael J. Korenberg,  Yolanda Madarnas, 
  • First Published: 20 February 2012
Review Article
Open Access

Inferring Biological Mechanisms by Data-Based Mathematical Modelling: Compartment-Specific Gene Activation during Sporulation in Bacillus subtilis as a Test Case

Dagmar Iber, 
  • First Published: 23 January 2012
Research Article
Open Access

Structural Basis for Species Selectivity in the HIV-1 gp120-CD4 Interaction: Restoring Affinity to gp120 in Murine CD4 Mimetic Peptides

Kristin Kassler,  Julia Meier,  Jutta Eichler,  Heinrich Sticht, 
  • First Published: 19 January 2012
Research Article
Open Access

Features-Based Deisotoping Method for Tandem Mass Spectra

Zheng Yuan,  Jinhong Shi,  Wenjun Lin,  Bolin Chen,  Fang-Xiang Wu, 
  • First Published: 04 January 2012
Research Article
Open Access

Polynomial Supertree Methods Revisited

Malte Brinkmeyer,  Thasso Griebel,  Sebastian Böcker, 
  • First Published: 21 December 2011
Research Article
Open Access

GenSensor Suite: A Web-Based Tool for the Analysis of Gene and Protein Interactions, Pathways, and Regulation

Mark Gosink,  Sawsan Khuri,  Camilo Valdes,  Zhijie Jiang,  Nicholas F. Tsinoremas, 
  • First Published: 13 December 2011
Research Article
Open Access

Generation and Analysis of Large-Scale Data-Driven Mycobacterium tuberculosis Functional Networks for Drug Target Identification

Gaston K. Mazandu,  Nicola J. Mulder, 
  • First Published: 29 November 2011
Research Article
Open Access

An Integrated Framework to Model Cellular Phenotype as a Component of Biochemical Networks

Michael Gormley,  Viswanadha U. Akella,  Judy N. Quong,  Andrew A. Quong, 
  • First Published: 29 November 2011
Research Article
Open Access

NovelSNPer: A Fast Tool for the Identification and Characterization of Novel SNPs and InDels

Jens Aßmus,  Armin O. Schmitt,  Ralf H. Bortfeldt,  Gudrun A. Brockmann, 
  • First Published: 31 October 2011
Research Article
Open Access

Prediction of Enzyme Mutant Activity Using Computational Mutagenesis and Incremental Transduction

Nada Basit,  Harry Wechsler, 
  • First Published: 09 October 2011
Research Article
Open Access

A Growth Curve Model with Fractional Polynomials for Analysing Incomplete Time-Course Data in Microarray Gene Expression Studies

Qihua Tan,  Mads Thomassen,  Jacob v. B. Hjelmborg,  Anders Clemmensen,  Klaus Ejner Andersen,  Thomas K. Petersen,  Matthew McGue,  Kaare Christensen,  Torben A. Kruse, 
  • First Published: 27 September 2011
Research Article
Open Access

Computational Design of a DNA- and Fc-Binding Fusion Protein

Jonas Winkler,  Giuliano Armano,  J. Nikolaj Dybowski,  Oliver Kuhn,  Filippo Ledda,  Dominik Heider, 
  • First Published: 14 September 2011
Research Article
Open Access

Data-Driven Compensation for Flow Cytometry of Solid Tissues

Nickolaas Maria van Rodijnen,  Math Pieters,  Sjack Hoop,  Marius Nap, 
  • First Published: 06 September 2011
Research Article
Open Access

Predicting Flavonoid UGT Regioselectivity

Rhydon Jackson,  Debra Knisley,  Cecilia McIntosh,  Phillip Pfeiffer, 
  • First Published: 30 June 2011
Research Article
Open Access

Cotranslational Protein Folding and Terminus Hydrophobicity

Sheenal Srivastava,  Yumi Patton,  David W. Fisher,  Graham R. Wood, 
  • First Published: 06 June 2011
Research Article
Open Access

ModEnzA: Accurate Identification of Metabolic Enzymes Using Function Specific Profile HMMs with Optimised Discrimination Threshold and Modified Emission Probabilities

Dhwani K. Desai,  Soumyadeep Nandi,  Prashant K. Srivastava,  Andrew M. Lynn, 
  • First Published: 29 March 2011